Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKVVRRYPLALLLGMAGALADELPDGSLLQRYGVQ------ADQLPTLAADPPSRKEEKETPSRFRVEPEQPLVTFGVKDHKGMEPTGNPSIDAMHERDRRICRNIRRQALEKGKAQPFDGYIECP
2CO5 Chain:A ((5-96))
KYMRINYYIILKVLVINGSRLEKKRLRSEILKRFDIDISDGVLYPLIDSLIDDKILREEEA---------PDGKVLFL--------TEKGMKEFEELHEFFKKIVCHHH-------------------
General information:
TITO was launched using:
RESULT:
Template:
2CO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1099 for 523 contacts (-2.1/contact) +
2D Compatibility (PS) -8636 + (NN) 203 + (LL) 1692
1D Compatibility (HY) -6800 + (ID) 800
Total energy: -15440.0 ( -29.52 by residue)
QMean score : 0.262
(partial model without unconserved sides chains):
PDB file :
Tito_2CO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CO5-query.scw
PDB file :
Tito_Scwrl_2CO5.pdb
: