Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAGD-DGCPYLCPG-TPQRPGYLVEALSQVLR---EPPHFDSLP-WPRAVQMVRDGHRDGLVGAYGL----DGLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGE-LPGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
| 3MPK Chain:A ((28-251)) | -----------------MADHPVVKVAVLNLFAPFTLFRTDEQFGGISAAVLQLLQLRTGLDFEIIGVDTVEELIAKLRSGEADMAGALFVNSARESFLSFS-RPYVRNGMVIVTRQDPD-APVDADHLDGRTVALVRNSAAIPLLQRRYPQ-------AKVVT-ADNPSEAMLMVANGQADAVVQTQISASYYVNRY-FA-GKLRIASALDLPPAEIALATTRG---QTELMSILNKALYSISN-DELASIISRWR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88563 for 1713 contacts (-51.7/contact) +
2D Compatibility (PS) -22985 + (NN) -11286 + (LL) 2500
1D Compatibility (HY) -4400 + (ID) 1600
Total energy: -126334.0 ( -73.75 by residue)
QMean score : 0.349
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