Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKALKTLFIATALLGSAAG--------VQAADNFVGLTWGETSNNIQKSKSLNRNLNSP------NLDKVIDNTGTWGIRAGQQF---EQGRYYATYENISDTSSGNKLRQQ---------NLLGSYDAFLPIGDNNTKLF-----GGATLGLVKLEQDGKGFKRDSDVGY------AAGLQAGILQELSKNASIEGGYRYLRTNASTEMTPHGGNK--LGSLDLHSSS-QFYLGANYKF------- |
| 5CMN Chain:E ((3-260)) | LCPGLLKGVYQSEHLFESDHQSGAWCKDPLQASDKIYYMPWTPYRTDTLTEYSSKDDFIAGRPTTTYKLPHRVDGTG-FVVYDGALFFNKERTRNIVKFDLRTRIKSGEAIIANANYHDTSPYRWGGKSDIDLAVDENGLWVIYATEQNNGKIVISQLNPYTLRIEGTWDTAYDKRSASNAFMICGILYVVKSN-KIDYIYNTDQSKDSLVDVPFPNSYQYIAAVDYNPRDNLLYVWNNYHVVKYSLDF |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CMN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7706 for 1422 contacts (5.4/contact) +
2D Compatibility (PS) -20677 + (NN) 2987 + (LL) 196
1D Compatibility (HY) -11200 + (ID) 1950
Total energy: -22938.0 ( -16.13 by residue)
QMean score : 0.143
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