Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALARS------GGDYRLEPSAQPM-PQSRAQLRLE--------QDDPGLQVMWAQSRDDLEETLLPIR-IPIYRGL--------IGWRI---------------------------PLVSAANKDILASARTLDDLRRLRFGQRQDWADTPILRANGLEVKTSQNYESLFRMLDAGRFEVFPREVVVIDGELEDASRAGLHLAIDQHLALHYPAAFYF-----FVSRQRPELAEAIRQGLEKAIADGSFERLFER---HFKTRLEKLALRQRRIIELKNPYLPGKT--PFQREALWYRP--------------------------------------------------- |
| 4NY2 Chain:A ((5-408)) | PKGTIYLTFDDGPVNASVEVIKVLNQGGVKATFYFNAWHLD----------GIGDENEDRALEALKLALDSGHIVGNHSYDHMIHNCVEEFGPTSGADCNATGNHQIHSYQDPVRDAASFEQNLITLEKYLPTIRSYPNYKGYELARLPYTNGWRVTKHFQADGLCATSDNLKPWEPGYVCDPANPSNSVKASIQVQNILANQGYQTHGWDVDWA--PENWGIPMPANSLTEAVPFLAYVDKALNSCSPTTIEPINSKTQEFPC-GTPLHADKVIVLTHDFLFEDGKRGMGATQNLPKLAEFIRIAKEAGYVFDTMDNYTPRWSVGKTYQAGEYVLYQGVVYKAVISHTAQQDWAPSSTSSLWTNADPATNWTLNVSYEQGDIVNYKGKRYLVSVPHVSQQDWTPDTQNTLFTALEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81143 for 2162 contacts (-37.5/contact) +
2D Compatibility (PS) -29736 + (NN) -2480 + (LL) 788
1D Compatibility (HY) -400 + (ID) 2900
Total energy: -115871.0 ( -53.59 by residue)
QMean score : ?
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