Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHQRQHFEALAEDLRRHLAEGEDFTLWYSAEDSEFIRF-NRARVRQAGRVRQASALLRLIRDERQASLDLTLSGAPEEDRQRLAEGLRQLRQSLAWIPADPYLLLDTSAWQRENQDLGAAPDSGALLASLERRARDLDLVGIYAAGPLFRGFANSWGAFGWHAGSSFNFDWSLFHGNGQAVKADYAGQRWDDEAFARRFEQAREQLGHLGKPLRQLRPGDYRAYLAPAALEEVMQMLCWGGFSARALATGESPLQRLQNGDALLSPLLNLAERPATSPSPAFSAEGSPRAE-VELVGNGRLSGRLVSSRSAREYG-----LVANGAGANEAPTALDMAGGSLEQARILEALDTGLYIGNLWYLNYSDMPAARLTGMTRFA-----TFWVENGQIRAPVSTMRFDDSLYSFLGAHLEDLSHERELRLSSNTYGERQTDSMHLPGALTGRFTLTL |
| 3FHC Chain:A ((9-405)) | IPEREMKDFQFRALKKVRIFDSPEEL--PKERSSLLAVSNKYGLVFAG----GASGLQIFP-----TKNLLIQNKPGDDPNKIVDKVQGLLVPMKF----PIHHLALSCDNLTLSACMMSSEYGSIIAFFD-----------------VRTFSNE--------AQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL-------PSTVA--VTSVCWSP-KGKQLAVGK------QNGTVVQY-LPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPV--TDKSDDSLPMGVVVDYTNAPVLMLLS-------TDGVLCPFYMIN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4802 for 3029 contacts (1.6/contact) +
2D Compatibility (PS) -36650 + (NN) 5007 + (LL) 5404
1D Compatibility (HY) -16400 + (ID) 2850
Total energy: -40687.0 ( -13.43 by residue)
QMean score : 0.085
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