Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTWIYAASAAAIGGALIGGWLLDPAPPEASPQARQSPAAQAAAAPTAALAAPAADATRMLAPTPVTTPAPRERVTLWQGELRSREGAQGIPEYLAQVEPALLDTLALGQVLE-MSLPGRERPLQARLASTHNSAGLPVWRGGLVDGDEAESLTVVRGSLETHINVATLDGSYSIIVDNRSGKTRVIDENDIAARSDPHGDHVDAPLAELPPMPPPAQG |
1BV9 Chain:B ((2-44)) | --------------------------------------------------------------------------QVTLWQRPLVTIKIG-------GQLKEALLDTGADDTVLEEMSLPGRWKP------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1BV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2955 for 161 contacts (18.4/contact) +
2D Compatibility (PS) -4095 + (NN) 1968 + (LL) 9268
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: 5346.0 ( 33.20 by residue)
QMean score : -0.018
|
|
|