Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKIKRGLDLPISGAPEQRIEAARPVRSVALIGFDYHGMKPTMAVQVGDRVKLGQVLFTDKKNPSVSYTAPGAGVVSAIHRGEKRVLQSVVIDLDGDEQLEFARYPADKLATLSAEQVRDNL-LQSGLWTALRTRPFSKVPDPESSPSSIFVTAIDTQPLAADPQVVIAEQGEAFQAGLTVLGRLARVFLCKAEGVSLPGEALSGVTAQAFSGPHPAGLPGTHIHFLDPVGAGKSVWNLNYQDVIAIGKLFTTGQLWTERVIALAGPVVEKPRLVRTRLGANLDELAAGQLQPGNNRLISGSVLGGRTAHGAYAYLGR--YHLQLSCLKEGDQREF---LHYLRAGVEKHSLLNVFVSRLLGGKRFAFTTSTNGSPRAMVPV--GNYEAVMPLDI--------------LPTQLLRYLIV-GDTEMAQKLGALEL-----DEEDLALCSYVCAGKYEYGPILRDNLARIEQEG |
| 4XD1 Chain:A ((21-417)) | MKLIIAGKNNIAVDVTKWIIKTISDIELYSVCNENDHG---------NDSFQLSFKKFCIQFNI------PIISLEDAYHLED-----AIFLSLEFDKIIHPSKFTHNRIFNIHFSYLPAYKGMYTSAWPILN----------NEQESGVTLHKIDHGI---DTGAIIDQQKFPLDIEET---AKTLYLKYIKIGTEIVIKNLPALISGNYSIVEQSAIKSSYY----------SKKSIDYKNLM-----IDLNKTAHEILQQIRAFTFRDYQLPRI----------------DDIDIFHGEILSSKSLSKPGTILEKNNYHLILSTI-DYDIKLYSDNFDEILTACEDKS--PEFISKLLKTENILFEKNHLGASPIIIAAYHGNMDVIEWLVSKGVNINDRNYKGTTVAMYFKDYMLRSGNYTGLENLINLGLDLFLKDNEGLSVFDYMRKNKN------IELFNFMSTFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XD1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78473 for 2835 contacts (-27.7/contact) +
2D Compatibility (PS) -38221 + (NN) -5710 + (LL) 5020
1D Compatibility (HY) -20400 + (ID) 3100
Total energy: -140884.0 ( -49.69 by residue)
QMean score : 0.235
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