Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNVRAYQDRGLLPPPERRGRVGVYFDSHLKRLRLISQLLERGYSSANIKELLEAWEQGRDLDHVLGLDQAIIGEWNLETPGSIGFDELQAIFGDELNDRVIDKAQALGLLLFD-G--ER---MKIPSPRLFQAGLELYRSGIPLEALLDQLGELRSDTEHLAAGIVRLIVTHLVDGRGTDLLPGAPDLQELAKVFLRLRPLAEHVVQVELARGLKLSANEMLGERVGEMLRKLEKPS |
| 3GP4 Chain:A ((2-72)) | ----------------------------------------------------------------------------------SLNIKEASEKSGV--SADTIRYYERIGLIPPIHRNESGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALF----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30987 for 413 contacts (-75.0/contact) +
2D Compatibility (PS) -7162 + (NN) -1589 + (LL) 11964
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -31274.0 ( -75.72 by residue)
QMean score : 0.607
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