Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNDMEDHLLTVLSVASGVPKEEISRDSRM-EDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLE-----------TVDELFQLVEKHRAA
2KW2 Chain:A ((4-88))
----TFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAARIDELV--
General information:
TITO was launched using:
RESULT:
Template:
2KW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36322 for 492 contacts (-73.8/contact) +
2D Compatibility (PS) -7846 + (NN) -6299 + (LL) 200
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -54217.0 ( -110.20 by residue)
QMean score : 0.696
(partial model without unconserved sides chains):
PDB file :
Tito_2KW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KW2-query.scw
PDB file :
Tito_Scwrl_2KW2.pdb
: