Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSHQERPLIGLLFSETGVTADIERSQRYGALLAVEQLNREG-GVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSHTRKAVMPVVERADALLCYPTPYEG-F---EYSPNIVYGGPAPNQNSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVMRHLYRQHGGTVLEEIYIPLYPSDDDVQRAVERIYQA-----RADVVFST-VVGTGTAELYRAIARRYGDGRRPPIASLTTSEAEVAKMESDVAEGQVVVAPY-FSSIDTAASRAFVQACHGFFPENATITAWAEAAYWQTLLLGRAAQAAGSWRVEDVQRHLYDICIDAPQGPVRVERQNNHSRLSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASMGGGALP |
| 3N0X Chain:A ((4-348)) | ------DLKIALIYGKTGPLEAYAKQTETGLMMGLEYATKGTMTLDGRKIVVITKDDQSKPDLSKAALAEAYQDDGADIAIGTSSSAAALADLPVAEENKKILIVEPAVADQITGEKWNRYIFRTGRNSSQDAISNAVAIGK-QGVTIATLAQDYAFGRDGVAAFKEALAKTGATLATEEYVPTTT--TDFTAVGQRLFDALKDKPGKKIIWVIWAGGGDPLTKLQDMDPKRYG---IELSTGGNILPALAAYK--RLPGMEGATYYYYDIPKNPINEWLVTEHQKRFNAP--PDFFTAGGFSAAMAVVTAVQKAKSTDTEKLIAAMEGMEFDTPKGKMVFRKEDHQALQSMYHFKVKVDP------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N0X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215767 for 2925 contacts (-73.8/contact) +
2D Compatibility (PS) -36823 + (NN) -18509 + (LL) 1864
1D Compatibility (HY) -4400 + (ID) 2550
Total energy: -276185.0 ( -94.42 by residue)
QMean score : 0.690
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