Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLSRHA
3TZC Chain:B ((9-248))
----NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL-----NVTNPESIEAVLKAITDEFGGVDILVNNA---------------WSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVG-------ANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT--------------EQRTATLA---QVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM----
General information:
TITO was launched using:
RESULT:
Template:
3TZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -194992 for 1786 contacts (-109.2/contact) +
2D Compatibility (PS) -23416 + (NN) -11622 + (LL) 3428
1D Compatibility (HY) -10000 + (ID) 4200
Total energy: -240802.0 ( -134.83 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_3TZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZC-query.scw
PDB file :
Tito_Scwrl_3TZC.pdb
: