Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIFVFAALAGSAVLAGCASPQHGAIPVVDSGTPVSNQESGGFRITRTQVPRTQQGAATQGIPQGGDSGVVVMVPQGANSAPIQTFPAQSGAAPISSAPLGTGTQYQAPPSSASTPPLGGSYNMPPSGASRSAPTGIPASGSAGSLAADEQLDGPVLAMLTTAQQQQGSGDLNSAAASLERAQRIAP---REPQVLYRLAQVRLAQGDAAQAEQVARRGLSYANGRPALQAGLWELIAQAREKQGDSAGAALARQKAKVSS |
2DBA Chain:A ((26-128)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDV----KALYRRSQALEKLGRLDQAVLDLQRCVSL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DBA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4962 for 788 contacts (6.3/contact) +
2D Compatibility (PS) -11824 + (NN) -12118 + (LL) 5288
1D Compatibility (HY) 0 + (ID) 1050
Total energy: -14742.0 ( -18.71 by residue)
QMean score : 0.567
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