Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQRVYVALGSNLAEPREQIQAALDAFERLPETRLVAVSPLYISDPLGPADQPRFVNGVAALDTNLAPLDLLDALQAIELEQGRVRDL-RWGPRTLDLDILLFGEQLLDLPRLKVPHYHMQARAFVLYPLADLAPDLRLPDGRHLPELLAACPFEGIERLPGA
3ILJ Chain:A ((4-157))
-----YIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLALDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNK----
General information:
TITO was launched using:
RESULT:
Template:
3ILJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100535 for 1140 contacts (-88.2/contact) +
2D Compatibility (PS) -16283 + (NN) -8046 + (LL) 832
1D Compatibility (HY) -16800 + (ID) 3900
Total energy: -144732.0 ( -126.96 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_3ILJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ILJ-query.scw
PDB file :
Tito_Scwrl_3ILJ.pdb
: