Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSAGLGLLMLVAVVEFLIGLIGNGS-----LVVWSFREWIRKFNWSSYNLIILGLAGCRFLLQWLIILDLSLFPLFQSSRWLRYLSIFWVLVSQ---ASLWFATFLSVFYCKKITTFDRPAY--LWLKQRAYNLSLWCLLGYFIINLLLTVQIGLTFYHPPQGNSSIRYPFESWQYLYAFQLNSGSYLPLVVFLVSSGMLIVSLYTHHKKMKVHSAGRRDVRAKAHITALK------SLGCFL-----LLHLVYIMASPFSITSKTYPPDLTSVFIWE---------TLMAAYP-SLHSLILIMGIPRVKQTCQKILWKTVCARRCWGP |
| 19HC Chain:A ((1-292)) | AALEPTDSGAPSAIVMFPVGEKPNPKGAAMKPVVFNHLIHEKK------------IADCETCHHTGDPVSCSTCHTVEGKAEGDYITLDRAMHATDIAARAKGNTPTSCVSCHQSETKERRECAGCHAITTPKDDEAWCATCHDITP-------SMTPSEMQKGIAGTLLPGDNEALAAETVLAEATVAPVSPMLAPYKVVIDALADKYEP--------SDFTHRRHLTSLMESIKDDKLAQAFHDKPEILCATCHHRSPLSLT----PPKCGSCHTKEIDAADPGRPNLMAAYHLECMGCHKGMAVARPRDTDCTTCHKAAA------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 19HC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -201696 for 1670 contacts (-120.8/contact) +
2D Compatibility (PS) -25551 + (NN) 14017 + (LL) 2824
1D Compatibility (HY) 8400 + (ID) 2600
Total energy: -204606.0 ( -122.52 by residue)
QMean score : 0.165
|
|
|