Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASRYVAVGMILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLAL---RCKGVPQTMAAFGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITV--SSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLRAMLLSF-PDVLCLGLMLWVSSSMVCILHRHKQRVQHIDRSDLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDNPNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR |
| 1PQZ Chain:A ((5-242)) | --------------------GSESGLRYAYTLVVDGTANTARCFGTGHVDGEAFVGYSNNKTHGIGRWVNASHVEEENKEFVRQCKELQAELDKMQNNSAVIGVKTVQLDVGCTSKIEKHYAYDGNETEDDTATSASERARDCQKKLTEYRKLVLASAVSPQLEVERRSS------GREGGMRLRCFARDYYPADL---EIRWWKDD------GGGGALPQTSKQHHDPLPSGQGLYQKHIDVYVDGG-LEHVYSCRVK-----------------------------GIATGLELQIVR----WKG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159680 for 1636 contacts (-97.6/contact) +
2D Compatibility (PS) -23910 + (NN) 1253 + (LL) 5220
1D Compatibility (HY) 4400 + (ID) 1550
Total energy: -174267.0 ( -106.52 by residue)
QMean score : ?
|
|
|