Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPR-GLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEAN-DGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDD--EDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
| 3UGC Chain:A ((14-289)) | ---------------------------------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENE-NRVKIGDFGLTK-------------PGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76931 for 1980 contacts (-38.9/contact) +
2D Compatibility (PS) -28338 + (NN) -15642 + (LL) 2696
1D Compatibility (HY) -13200 + (ID) 2850
Total energy: -134265.0 ( -67.81 by residue)
QMean score : 0.409
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