Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MKSMDPIIGASSRILRSTPRKLNLVADLVRNKKVSFATVQLRFCE------------------------------KKAAGLIGKVLNSAIANAQYNYGLDIDNLYIKEILIGKSFTLHRVCPKAMGRANRVSKHYSNITIKLRQIV
1JJ2 Chain:Q ((1-150))
GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQ-GFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP-
General information:
TITO was launched using:
RESULT:
Template:
1JJ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58222 for 826 contacts (-70.5/contact) +
2D Compatibility (PS) -11898 + (NN) -2776 + (LL) 284
1D Compatibility (HY) 3200 + (ID) 1250
Total energy: -70662.0 ( -85.55 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_1JJ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JJ2-query.scw
PDB file :
Tito_Scwrl_1JJ2.pdb
: