Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MHQTIRVNHAGEYGAICIYYGQKFILKK---SSIINKIIEMEGQEKKHFHYFNGKIKEQKVRPTVLLPVWYVLGVSLGVITAIMGKKAAMACTAAVEEVIGEHYREQVSYLED---GELKEIISKFCNEELEHRD-IAIEHNAESALGYNILSSFVKTGCKVAIYLSKLI---
1BCF Chain:A ((1-157))
MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGED---------VEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMG-------------LQNYLQAQIREE
General information:
TITO was launched using:
RESULT:
Template:
1BCF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25313 for 1005 contacts (-25.2/contact) +
2D Compatibility (PS) -14780 + (NN) -4819 + (LL) 1560
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: -46552.0 ( -46.32 by residue)
QMean score : 0.184
(partial model without unconserved sides chains):
PDB file :
Tito_1BCF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BCF-query.scw
PDB file :
Tito_Scwrl_1BCF.pdb
: