Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTLNKDEHNYIKQIANIHETLLSQAESNYKCTKLSIALRYEMICSRLEHT-NDKIYIYENEGQLIAFIWGHFSN----EKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTM-NAKRISSTIHKNNLPMISLNKDLGYQVSHVKMYKDID
3DSB Chain:A ((9-148))
IREARMDDLDTIAKFNYNLAK---ETEGK----ELDMDVLTKGVKALLLDERKGKYHVYTVFDKVVAQIMYTYEWSDWRNGNFLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKENINAKATYESLNMYECDYN------
General information:
TITO was launched using:
RESULT:
Template:
3DSB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66498 for 885 contacts (-75.1/contact) +
2D Compatibility (PS) -14675 + (NN) -5483 + (LL) 1004
1D Compatibility (HY) -6800 + (ID) 1050
Total energy: -93502.0 ( -105.65 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_3DSB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DSB-query.scw
PDB file :
Tito_Scwrl_3DSB.pdb
: