Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYKQSAEDILNAIGGEENLDAMAHCATRLRLVLNDESLVNEEALNNMDVVKGTFSTGGQYQIIIGSGTVNKVFSELEKLTGKEASTTSEVKAQSAKNMNPLQRFVKMLSDIFVPIIPAIVAGGLLMGLNNILTAKDL-FFSGKSLIDVYSQFAGLAEMINVFANAPFTLLPILIGFSAAKRFGGNPFLGAV--LGMILVHPSLMSAYDFPKAVEAGKAIPYWDVFGLHINQVGYQGQVLPMLVAAYILASIEK-GLRKVIPTVLDNLLTPLLSIFITAFLTFSFVGPITRQLGYWLSD-GLTWLYEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNVAQGGAAIAAFFIIKQNKKL-------------KGVASAAGISALLGITEPAMFGVNLKLR--YPFIGAIVGSGIGSAYIAFFKVKAIALGTAGLPGFISINPVHAGWLHYFVGMTISFIIAITVTLI---LSKRKANKEVVE------------ |
| 1JVG Chain:A ((2-517)) | --NINDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGF---------DARMEPVPREVLGSATRDQDQLQAWESEGLFQISQ--------NKVAVLLLAG--GQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGK-IILEEKNKVSMAPDG-NGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRLLFNAGNI-------ANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFVVYEVLREDEFSPLKNADSQNGKDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPAIPRSVPIQCEISPLISYAGEGLESYVADKEFHAPLIIDENGVHEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261077 for 3616 contacts (-72.2/contact) +
2D Compatibility (PS) -47268 + (NN) 7455 + (LL) 2564
1D Compatibility (HY) -4400 + (ID) 2750
Total energy: -305476.0 ( -84.48 by residue)
QMean score : 0.156
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