Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVPDRRVSKTRAAKRRTHYSVKLAKPVKAKDGTWKLPHHINKFTKEY---------------------------------------------------- |
1LKN Chain:A ((1-89)) | MEVKIEKPTPEKLKELS-----------VEKWPIWEKEVSEFDWYYDTNETCYILEGKVEVTTEDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKHYNLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7198 for 108 contacts (66.6/contact) +
2D Compatibility (PS) -3747 + (NN) 2309 + (LL) 852
1D Compatibility (HY) 0 + (ID) 200
Total energy: 6412.0 ( 59.37 by residue)
QMean score : 0.553
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