Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFEPYPFERLRALFKEITPKKKGLDLGIGEPRFETPKFIQDALKSHTH-SLNIYPKSAFEESLREAQRGFFKRRFKIELKENELVSTLGSREVLFNFPSFVLFDYPNPTIAYPNPFYQIYEGSAQFARAKSLLMPLVKEND---FT-PSLNEKEL-QEVDLVILNSPNNPTGRTLSLEELIAWVKLALKHDFILINDECYSEIYENTP-PSSLLEACMLADNGAFKNVLVIHSLSKRSSAPGLRSGFIAGD-SSLLEKYKAFRTYLG-YTSANAIQKASEVAWLD-DRHAEFFRNIYANNLKLARKIFKE------TLIYPYSFYAYLPVKD----GENFAKTLYQNEGITTLPALYLGRNHIGADYVRLALVYDTSLLEKPLEIIEAYRENYA |
| 1C7N Chain:A ((27-393)) | -----------------PEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTG--PTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDG--VIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSID----EQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDG--GIGFERINLAAPSSVIQESLERLNKALKDLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C7N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129973 for 2895 contacts (-44.9/contact) +
2D Compatibility (PS) -36947 + (NN) -15147 + (LL) 2268
1D Compatibility (HY) -14800 + (ID) 2550
Total energy: -197149.0 ( -68.10 by residue)
QMean score : 0.477
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