Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHYSYEAFLKDSLELAKQVERLC--GIPEALVCVMRGGMTLVHFLSLHWNLRE-VYGINAISYDTTKRQNALKIENTPTIKDHLKTILVVDEIVDSGNSLEAVLKVLQDKHPDKKFYSASLFQKTSA----KYKADAFLKD-APEWID-FFWEVDLKNLKSH
1HGX Chain:A ((13-169))
VLYNQDDIQKRIRELAAELTEFYEDKNP-VMICVLTGAVFFYTDLLKHLDFQLEPDYIICSS---------LTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKP-ASLKVCTLCDKDIGKKAYDVPIDYCGFVVENRYIIGYGFDFHNKYRNLP
General information:
TITO was launched using:
RESULT:
Template:
1HGX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81330 for 986 contacts (-82.5/contact) +
2D Compatibility (PS) -14680 + (NN) -3929 + (LL) 496
1D Compatibility (HY) -9600 + (ID) 1500
Total energy: -110543.0 ( -112.11 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_1HGX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HGX-query.scw
PDB file :
Tito_Scwrl_1HGX.pdb
: