Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWITQEITPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQLLFKNF-LHIESELLAHMGGCTKKELREVLIVDGFDLELAHQLFKY-D-TRIDFVQADEKILDSFISFFPHFH----EVKNNKNFTHAKQLLDLDIKKYDLIL-CLQE----P----DIHKIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNLGDFFPITIPFVAPLRIL--SNKGYIYASFKTHPLKDLMTPKIEALKSVRYYNEDIHRAAFALPKNLQEVFKDNIKS |
1IY9 Chain:A ((4-275)) | LWYTEKQTKNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIGSKKYDPLAVE-DSR-FFDIETKYYTKDIHKAAFVLPKFVSDLI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132499 for 2104 contacts (-63.0/contact) +
2D Compatibility (PS) -26346 + (NN) -1621 + (LL) 560
1D Compatibility (HY) -13600 + (ID) 2900
Total energy: -176406.0 ( -83.84 by residue)
QMean score : 0.402
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