Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEVHDYGINFWSNNEFKIEKGLVKVCHGKNPSLLEIVQSVHDKGYRGPLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLNYGLEAGSKSELIIAMSYTN-PTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNDFVACPKIGIRIRLHSAGTGVW-AKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEYNEKSLKIKENNNPPLIDEMLDLLANINEKNAIEYLHDSFDHTESLFTLFDLGYIDLIDRSNTEVLAHLIVKKAVQLFYVKDHNDILRIQEQVQERYLLNWSFFQSLPDYWGLRQNFPVMPLNK-LDEKPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTILDVLDDLDYDTKEIERLLKQKIEDNNQLDMEEKKEIMGRLYVMLSENGYLRTIS |
| 3VAB Chain:A ((37-437)) | ------------------------------NVSLPEIA-----KAVGTPFYVYSRATIERHFRVFHDAFAD--------MDTLVTYALKANSNQAVLTALAKLG----AGADTVSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALE---AGIY-CFNVESEPELEILSARAVAA--GKVAPVSLRINPDVDAKTHAKI---KSENKFGIPRDKARAAYARAASLPGL-NVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGH-NIRHVDVGGGLGIPYRTP------PPPPVAYAQIVAKHIKP-------LGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK--------------------------------------------------------------------------------------------NFVIVDAAMNDLIRPT-LYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLG----LDREVAKPAPG---DLIAICTTGAYGAVLSSTYNSRLLIPEVLGDG---ER--YHVVRPRRTYEELLALDSVPDWL----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VAB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259333 for 3338 contacts (-77.7/contact) +
2D Compatibility (PS) -41784 + (NN) -8732 + (LL) 15488
1D Compatibility (HY) -8800 + (ID) 3850
Total energy: -307011.0 ( -91.97 by residue)
QMean score : 0.436
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