Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQQKKIQILKDLVNIDSTNG-----HEEQVANYLQKLLAEHGIESEKVQYDLDRASLVSEIGSSNEKVLAFSGHMDVVDAGDVSKWKFPPFEATEHEGKLYGRGATDMKSGLAAMVIAMIELHEEKQKLNGKIRLLATVGEEIGEL-GAEQLTQKGYADDLDGLIIGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPE-FGVNAIDNLLLFYNEVEKFVKSIDA-TNEILGDFIHNVTVIDGGNQVNSIPEKAQLQGNIRSIPEMDNETVKQVLVKIINKLNKQENVNLELIFD-YDKQPVFSDKNSDLVHIAKSVASDIVKEEIPLLGISGTTDAAEFTKAKKEFPVIIFGPGNET-PHQVNENVSIGNYLEMVDVYKRIATEFLS |
| 2F7V Chain:A ((7-368)) | -LLASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYAVRG---TPKYLFNVHLDTVPDSP--HWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLARGL--PYDAVLVAEPTMSEAVLAHRGISSVLMRFAGRAG------DPAASALHQAMRWGGKALDHVESLAHARFGGLTGLRFNIGRVDGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADPAA----AHFEETFRGPSLPSGDIARAEERRLAARDVAD-ALDLP-IGNAVDFWTEASLFS--AGGYTALVYGPGDIAQAHTADEFVTLAQLQRYVESVNRIINGS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70806 for 2962 contacts (-23.9/contact) +
2D Compatibility (PS) -35896 + (NN) -13889 + (LL) 1980
1D Compatibility (HY) -6800 + (ID) 3750
Total energy: -129161.0 ( -43.61 by residue)
QMean score : 0.460
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