Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQGDAIYIKAPSGEDILIDAGNKGKGKT---------------VVNYLKKLKV-KDIEIMIASHSDADNIGGLPEVMNNIKVKNLYAPKSTNTTAAYKNFVNTAKKKKLTIKTAKAGVKLPVKGVNAQFVGPVKTYGKTDRN--------NWSAVLHVAY-KKNTFLFTGDAQTKAEN-DMIKAKKTLRADVLKVSTQGSK-----------AATSKAFVNVVKPKYAIISVGKNG--YGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSYSIGK |
| 3RPC Chain:A ((3-262)) | ------------------------------AMTQYTHIR---NATGKLTI-KNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWDDTAINSIPKS-LPIFVQNTADK-----ELITSQ---GF-IDVRIIFESLEFNGITLRKTGGSHGTVE-MYANPVLAPLAGDAMGVIFEAADEPTVYLVGDTVWTSDVEKALL---RFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKGNN-------IESHVAVPEDGETI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36572 for 1814 contacts (-20.2/contact) +
2D Compatibility (PS) -23713 + (NN) -5851 + (LL) 4920
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -66416.0 ( -36.61 by residue)
QMean score : 0.407
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