Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKMGFIGNGKSTNRYHLPFILERD-NIEVKTIYNRNP-KT-ATWDKIEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEAKEIFELAKERGLLVQCYQNRRFDSDFLTAQKVIESGKLGELLEVEMHYDYFRPEI---PESVHEFKF-YDSYLYGHGCHTIDQVLSYFGKPDNIHYDVRQLLGEGRMNDYFDLDLYYG-VTKVSVKSSYFRIK--ARPSFVLYGKKGTFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYGTLTYVDDAGVWHEEKVISEVGDYGRVYDDLYEAIINGKPKQVTDEETLLQMEILEKGVEACK |
| 3Q2I Chain:A ((13-343)) | KIRFALVGCGRIANN-HFGALEKHADRAELIDVCDIDPAALKAAVERTG-ARGHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVNVFWTRPQEYYDAAGWRGTWEFDGGAFMNQASHYVDLLDWLIGPVESVQAYTATLARNIEVEDTGTVSVKWRSGALGSMNVTMLTYPKNLEGSITILGEKGSVRVGGVAVNEIQHWE---FSE------PHAMDEEIKD-A---S---------GFGHPLYYDNVIKTMRGEATPETDGREGLKSLELLIAMYLSAR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3Q2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -116768 for 2721 contacts (-42.9/contact) +
2D Compatibility (PS) -33942 + (NN) -8949 + (LL) 1256
1D Compatibility (HY) -6800 + (ID) 2100
Total energy: -167303.0 ( -61.49 by residue)
QMean score : 0.385
|
|
|