Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKKIILSIATIAATASLAVSVQASEKVELKVATDSDTAPFTYQKDGKFKGYDVDVVKAVFKGSKYKVTFKTV-PFDTISTGIDAGKFDLSANDFSYNKERAEKYLFSDPISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYVSGTTGVTSRLKNIESGKIDFILYDAISSDYIVKDQS-LNLSVSPLKGKIGNNKDGLEY-LLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK
2PYY Chain:A ((4-223))----------------------------PLLVAT-RVIPPFVLSN---LSGFSIDLWRSIATQIGIESKLIEYSSVPELISAIKDNKVNLGIAAISITAEREQNFDFSLPIFASGLQIMVRN-GDIRSIDDLPGKVVATTAGSTAATYLREHH--------ISVLEVP-K--IEEAYKALQTKKADAVVFDAPVLLFYAANEGKGKVEI--VGSI---L-REESYGIILPNN---SPYRKPINQALLNLKENGTYQSLYDKWFDP--------


General information:
TITO was launched using:
RESULT:

Template: 2PYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91803 for 1711 contacts (-53.7/contact) +
2D Compatibility (PS) -22402 + (NN) -5042 + (LL) 2524
1D Compatibility (HY) -16000 + (ID) 2400
Total energy: -135123.0 ( -78.97 by residue)
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_2PYY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PYY-query.scw
PDB file : Tito_Scwrl_2PYY.pdb: