Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCKYKAIIFDMDGVLFDTELFYYKRRERFLKQHGITIDHLPMNFFIGGNMKQVWKSVLGDQYDTWDIDKLQQDYSRYKEDNPLPYKDLIFQDCKRVIEKLHHKGYLLGLASSSTRHDIMLALESFNLDTYFKVILSGEEFSESKPNPAIYNRAAELLDIPKQQILIVEDSEKGITAGIAAGIDVWAIEDK-YFGMNQSQANVLVSDLSQFFVKLDNY
3E58 Chain:A ((4-214))
--MVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGM-DQSAAKGLLDSLTDVLDLI---
General information:
TITO was launched using:
RESULT:
Template:
3E58.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129672 for 1751 contacts (-74.1/contact) +
2D Compatibility (PS) -22835 + (NN) -12617 + (LL) 408
1D Compatibility (HY) -24000 + (ID) 5650
Total energy: -194366.0 ( -111.00 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3E58.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E58-query.scw
PDB file :
Tito_Scwrl_3E58.pdb
: