Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDIKEIREALPHRYPMLLVDRVLEVSEDE-IVAIKNVSINEPFFNGHFPEYPVMPGVLIMEALAQTAGVLEL-SKEENKGKLVFYAGMDKVKFKKQVVPGDQLVMTAKFVKRRGTIAVVEAIAEVDGKLAAS-GTLTFAIGN
3AZB Chain:D ((11-151))
-IDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSDDSQKNNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFK--IAKLSGVGYVNGKVVINISEMTFA---
General information:
TITO was launched using:
RESULT:
Template:
3AZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94649 for 971 contacts (-97.5/contact) +
2D Compatibility (PS) -14421 + (NN) -4155 + (LL) 40
1D Compatibility (HY) -17200 + (ID) 3300
Total energy: -133685.0 ( -137.68 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3AZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AZB-query.scw
PDB file :
Tito_Scwrl_3AZB.pdb
: