Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQSLNKTVEFQTTGVSYLGMGNKVGKFLVGDQALEFYNDKNVNDYIQIPWTSINQIGANVSRKKISRHFEVFTDQGKFLFASKDSGTILKHARRHIGDDKVVKLPTLIQTILKIFKFKK
2GLW Chain:A ((1-92))
----MDVLAKFHTTV-------HRIGRIIIPAGTRKFYGIEQ-GDFVEIKIVKYE-----GEEPKEGTFTARVGEQGSVI--------IPKALRDVIG---IKPGEVIEVLLLGHYKPRN
General information:
TITO was launched using:
RESULT:
Template:
2GLW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27225 for 616 contacts (-44.2/contact) +
2D Compatibility (PS) -10169 + (NN) -589 + (LL) 1148
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -42135.0 ( -68.40 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_2GLW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GLW-query.scw
PDB file :
Tito_Scwrl_2GLW.pdb
: