Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTISSAEWEIMRVVWAQQNTTSNEILAVLLEKYDWTPSTVKTLLRRLLDKGYVSREK---MGKGFSYSPLIDEDLAMMSEVDSVFQKVCQTKHVAIVRHLLESIPMTEKDRLNLQSSLEAKKGKTLERVACNCIPGQCQCH
2ETH Chain:A ((41-152))
-DMKTTELYAFLYVALFGPKKMKEIAEFL----STTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLT-E-------KGKEIFGEILSN-FESLLKSVLE--KFSEEDFKVVSEGFNRMVEALSRE-------------
General information:
TITO was launched using:
RESULT:
Template:
2ETH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43099 for 638 contacts (-67.6/contact) +
2D Compatibility (PS) -11489 + (NN) -4261 + (LL) 2480
1D Compatibility (HY) -6400 + (ID) 900
Total energy: -63669.0 ( -99.79 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_2ETH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ETH-query.scw
PDB file :
Tito_Scwrl_2ETH.pdb
: