Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MTKEKM-MSFMTIASIALLGS---------------GVVCANDVADPVAGTTD-V-VVVPVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSD------------LETSED-----KVTDPTETKP-SKEKTEEPVKSND-SEVI--PEQPK------SE----EVKKA-----EENTGASTTETPKPVTKPVIETPIVT---------------------------------------NTGYTVLGTQ--DGNVWVQT-ETGNVL-------KPAIAIGA------VKQKDGTVALKTKDGKLEV--LP-STGETKTILAILGGLAILGAIWVG------WKENIKKYLTFLK--KKSKK |
| 3B7F Chain:A ((16-393)) | SAPESGPVMLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPRE-PERMLMAARTLGPTVFRSDDGGGNWTEATRPPAFNKAPGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRG---LPTDQAWLTVKRQAMTADAHAPVGVYFGTTG--GEIWASADEGEHW-QCIASHLPHIYAVQSARP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24481 for 1594 contacts (15.4/contact) +
2D Compatibility (PS) -26205 + (NN) -4537 + (LL) 660
1D Compatibility (HY) -5200 + (ID) 2700
Total energy: -13501.0 ( -8.47 by residue)
QMean score : 0.337
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