Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIKRHSIFLWLTTSILAILMAVGMTIYFNTYQASPLARRIAKTATNHKNYLLFRSKGKVKANIIFYQGALVEEEAYSQLARDLADKGYNTYILKTPLNLPVLS--------------PHKAKTIINQNHLTNVYLAGHSLGGVVASQNAK--VAPVRGLILLASYPSRK---------------------------------------------------------------------------SDLSHKKLRVLSITASNDHILNWEKYEEAKKRLPNSSTFRTIVGGNHSRFGNYGHQKGDGKATLSHKSSEKQLATFISNFIH |
1WOM Chain:A ((18-268)) | ----------------------------------------------------------SGKASIMFAPGFGCDQSVWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP-YSSLKQMEARGHCPH----------------MSHPDETIQLIGDYLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65248 for 1291 contacts (-50.5/contact) +
2D Compatibility (PS) -16912 + (NN) -5556 + (LL) 5136
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -90630.0 ( -70.20 by residue)
QMean score : 0.527
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