Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKKNKVFLGVLLVLVVILGGGVLFYQSQF-QKTTNQALAIAYKDAKVAKKDVIHQKIDKEFENFRGSYEIEFNTKSAEYS-YHVDAKTGQILERDMDNNGFSKSTSQSSSSSSQKSHKIS-QEEAK-KIAFKDANIEESEVSNLKIKEEIENGKSVYDIDFVDLKNKNEVDYQIDAETGKIIERSRDHMND |
4EXR Chain:A ((22-173)) | --------------------------NENLMEQDFKVPYTDAINIFKDKYKDADIVDLSLERDLNKFVYTVEGVDDNNEYKMK-IDANTKDVLEDKTEKL--DSEDLNGVARKEKLDLNDIMTPQQAMEIALKEQN---GIVKEWSLDKD--LDVTFYKIRIDK--DKNEYDIKVDSKKGTVLKVEKE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 51814 for 1068 contacts (48.5/contact) +
2D Compatibility (PS) -15401 + (NN) -980 + (LL) 3664
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: 32547.0 ( 30.47 by residue)
QMean score : 0.227
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