Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITSIVFDVDDTIYDQQAPYRIAVEKCFPDFDMSAINQAYIRFRHYSDIGFPRVMAGEWTTEYFRFWRCKETLLEFGYRE---IDEATGIYFQEIYEHELENITMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVKKLGLYDYVDPKRVIVSQATGFQKPEKEIFNLAAEQFDMNPSTTLYVGDSYDNDIMGAFNGGWHSMWFNHRGRSLKPGIKPVYDVAIDNFEQLFGAVKVLFDLPDNKFIFDINDKSNPVLEMGLNNGLMMAAERLLESNMSVDKVVILLRLTAKQEKVLRMKYAR |
| 3S6J Chain:A ((5-223)) | PQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAM--W-RIHRK--IGMSGG-------LMLK-----SLSRE----ITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI--NIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAI-WDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIAS--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89043 for 1936 contacts (-46.0/contact) +
2D Compatibility (PS) -22865 + (NN) -10706 + (LL) 6424
1D Compatibility (HY) -2000 + (ID) 1900
Total energy: -120090.0 ( -62.03 by residue)
QMean score : 0.449
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