Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKNKIKKTLVDQILDKAKIEHDSLQLD---ALQGDLPNGIQKQDIFKTLALIGDKTG-PIIGILPLTEH-LSEKKLAKISGNKKVQ-MIPQKDLQKITGYIHGANNPIGIRQKHNYPIFIDTIALEKQELIVSAGEIGRSIRINSEVLADFVNAKFADIKE- |
| 1DBX Chain:A ((2-158)) | ---------TPAIDLLKKQKIPFILHTYDHDPGDEAAEKLGIDPNRSFKTLLVAENGDQKKLACFVLATANMLNLKKAAKSIGVKKVEMA-DKDAAQKSTGYLVGGISPLG--QKKRVKTVINSTALEFETIYVSGGKRGLSVEIAPQDLAKVLGAEFTDIVDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DBX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9420 for 1177 contacts (8.0/contact) +
2D Compatibility (PS) -15045 + (NN) 1442 + (LL) 1132
1D Compatibility (HY) 4000 + (ID) 950
Total energy: -1.0 ( -0.00 by residue)
QMean score : 0.248
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