Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKLTGYEIDMMKAIAKKLKIKVKFVEV-GVAESFTSVDSGKVDVAVNNFDTTPERLK--KYNFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMKIAKQQGAEPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVK-MGDVKYNPTEQGIVMSKKDKSLKTKIDAAIKDMKKDGSLKKISEKYYAGQDLTKEPAGTDKIPVIKVK |
| 1II5 Chain:A ((3-226)) | ------------------------------------AMALKVGV-VGNPPFVFYG---AFTGISLDVWRAVAESQKWNSEYVRQNSISAGITAVAEGELDILIGPISVTPERAAIEGITFTQPYFSSGIGLLIPGTATPLF--RSVGDLKNKEVAVVRDTTAVDWANFYQADVRETNN--LTAAITLLQKKQVEAVMFDRPA----LIYYTRQNPNLNLEVTEI-RVSLEPYGFVLKEN-SPLQKTINVEMLNLLYSRVIAEFTERWLG-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1II5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54320 for 1783 contacts (-30.5/contact) +
2D Compatibility (PS) -24015 + (NN) -12752 + (LL) 4456
1D Compatibility (HY) -12400 + (ID) 2150
Total energy: -101181.0 ( -56.75 by residue)
QMean score : 0.464
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