Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQFLGEFLGTFILVLLGDGVVAGNVLSKTKEEGTGWTAIVFGWGIACTVAVYVSGLFSPAHLNPAVTLAMASIGAISWGQVIPFIIAQMLGAMVAATILWLHYYPHWKETKDSGLILASFSTGPAIR-HTPSNLLGEIIGTAILVITIMAIGPSKVAA----GLGPIIVGIVIFAVGFSLGPTTGYAINPARDLGPRLMHAILPIENKG-DSDWSYAWIPVVGPIIGGVLGAILYNIALTLI
3C02 Chain:A ((10-243))
VREFIGEFLGTFVLMFLGEGATANFHTTG---LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKI---PQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLI-AYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPL
General information:
TITO was launched using:
RESULT:
Template:
3C02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179971 for 2016 contacts (-89.3/contact) +
2D Compatibility (PS) -22893 + (NN) -551 + (LL) 372
1D Compatibility (HY) -26400 + (ID) 3450
Total energy: -232893.0 ( -115.52 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_3C02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C02-query.scw
PDB file :
Tito_Scwrl_3C02.pdb
: