Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKITKMVISSVLATVLMTACSQSSQNGQSDVKHIGILQYVE-HPSLTATRKGFIKELAKEGYKDGKNIKIEYKNAQGDQSNIQSISEKLIKD-NKLVLGIATP---AAQSLTTVSTETPILFTAVTDPVSAELVKSMKKPEGLATGTSDMSPIKKQVSLLRKVMPKVKRVGIMYTTSE-RNSEVQVKQAKKIFQEAGIKTSVK--G--ISSTNDVQDTAKSLMS---KTEVIFVPTDNIIASSVTLLGNLSKE--LKVPVVGGSADMVP--SG-LLFSYGADYEALGRQTARQAVKILKGKDVAKVPSEYPQNLKVVVNEDMAKELGIDVSSIKNNK |
| 1QPZ Chain:A ((56-312)) | -----------------------------NHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYT------LILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKA---------DFTDAVIDNAFEGGYMAGRYLIER--GHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYR-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49731 for 1971 contacts (-25.2/contact) +
2D Compatibility (PS) -25761 + (NN) -11012 + (LL) 4300
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -88854.0 ( -45.08 by residue)
QMean score : 0.480
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