Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIMGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEE-S-GNFGFDRLAELV-----KEYKVDKFVVGLPKNMNNTSGPR--V----EAS--QAYGDKITELFNLPVEYQDERLTTVQAERMLVEQADISRGKRKKVIDKLAAQLILQNYLDRMF
2YHW Chain:A ((31-143))
-SALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGS
General information:
TITO was launched using:
RESULT:
Template:
2YHW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40362 for 691 contacts (-58.4/contact) +
2D Compatibility (PS) -10258 + (NN) -1864 + (LL) 208
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -56926.0 ( -82.38 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_2YHW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YHW-query.scw
PDB file :
Tito_Scwrl_2YHW.pdb
: