Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVKKHHLAYGAITLVALFSCILAVMVIFKSSQVTTESLSKADKVRVAKKSKMTKATSKSKVEDVKQAPKPSQASNEAPKSSSQSTEANSQQQVTASEEAAVEQAVVTENTPATSQAQQAYAVTETTYRPAQHQTSGQVLSNGNTAGAIGSAAAAQMAAATGVPQSTWEHIIARESNGNPNVAN---ASGASGLFQTMPGWGSTA--------------------TVQDQVNSAIKAYRAQGLSAWGY |
| 1B9O Chain:A ((19-105)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------GGIALPELICTMFHTSGYDTQAIVENDESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDIKGIDYWLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11662 for 400 contacts (-29.2/contact) +
2D Compatibility (PS) -6858 + (NN) -2792 + (LL) 12348
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -12364.0 ( -30.91 by residue)
QMean score : 0.491
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