Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKRITFGLLVLMVCVILFVLYVQLRNKDSIPVQSSAIHPEEDRIFFIYSNPFIKESVLLSTSTGERFNRRTFKVADVPYIQTKSYASTDLVLLAEHEPFYYTLEKDVIKEHPLSDPFAFWYEGKDVTIEAYNVDTTGNEIHINDRKTKKEY-TLTLP--PLVTMGASDENFIYIIQS--MSIYVIDRKTEEMIETLSLASYADQFADSE--EFIVASS--DHKLTVIEKGTWKT-TYIAYPEDLEYADTVYYDKESGSFYVAYEDKEGGANLLEYGEDF-SI-HTYSLKFPYMEAK--FKGNLLYIVAQEEHKKGIGGYVGVFDIHSKEMLYQFDLPEEQVKVQDFVVVDNK
1L0Q Chain:A ((12-197))-------------------------------------------------------------------------------------------------------------------------------------------DNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK---SPLGLALSPDGKKLYVTNNGDK---TVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANF------DSMSISVIDTVTNSVIDTV------------------


General information:
TITO was launched using:
RESULT:

Template: 1L0Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 922 -99944 -108.40 -584.46
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -108.40
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_1L0Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L0Q-query.scw
PDB file : Tito_Scwrl_1L0Q.pdb: