Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKNKKLFEYLSQHAETISSTWYETIEETDPNSIYASTDPVVIHNLKSQNLAFNYKINRIFIDDEDVYLP--ILKEWAFEVTQDQEHLKTPIHYIIREFVRVRDLYVSYVKEFVHLNQNTVKSEEAEDLYHALIKAFDLVIHIFIEEMYKNTSLQLQAQKDMITELSAPVIVLFHSVGLLPLIGDIDTVRAKLIMENTLHQCAKKKVTQLYIDLSGVAVIDTMVAHQLFSLIEALRLIGVSSTLSGIRPEIAQTAVQLGLSFEGISLRSTLASAIASDLKLKKV
4ZVA Chain:A ((20-149))----AKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFL-SNEQVERQLKSA---MERWIINVLSAQ---VDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSD------YSAAEKLQVYHFSINSIDIAMEVMTRA-----------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ZVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 417 -23882 -57.27 -186.58
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -57.27
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_4ZVA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZVA-query.scw
PDB file : Tito_Scwrl_4ZVA.pdb: