Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVTIKKDFIPVSNDNRPGYAMAPAYITVHNTANTAK--GADAKMHAKFVKNPNT-SESWHFTVDDSVIYQHLPIDENGWHAGDGTNGTGNRKSIGIEICENADGDFEKATSNAQWLIRKLMKENNIPLNRVVPHKKWSGKECPRKLLDHWNSFLNGISSSDTPPKETSPSYPLPSGVIKLTSPYRKGTNILQLQKALAVLHFYPDKGAKNNGIDGVYGPKTANAVKRFQLMNGLTADGIYGPKTKAKLKSKLK
3RDR Chain:A ((5-156))-VNIIQDFIPVGANNRPGYAMTPLYITVHNTANTAVGADAAAHAR-YLK--NPDTTTSWHFTVDDTEIYQHLPLNENGWHAGDGNG-SGNRASIGIEICENADGDFAKATANAQWLIKTLMAEHNISLANVVPHKYWSGKECPRKLLDTWDSFKAGI------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 793 20953 26.42 140.62
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 26.42
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.601

(partial model without unconserved sides chains):
PDB file : Tito_3RDR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RDR-query.scw
PDB file : Tito_Scwrl_3RDR.pdb: