Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRLDKLLANSGYGSRKEVKAVVKAGAVMIDGKPAKDVKEHVDPDTQEVTVYGEPVDYREFIYLMMNKPQGVLSATEDSRQQTVVDLLTPEEMRFEPFPAGRLDKDTEGFLLLTNDGQLAHRLLSPKKHVPKTYEVHLKSQISREDISDLETGVYIEGGYKTKPAKAEIKTNDSGNTVIYLTITEGKYHQVKQMAKAVGNEVVYLKRLSMGRVSLDPALAPGEYRELTEEELHLLNEPQA
2GML Chain:A ((1-170))----------------------------------------------------------DLVLIALNKPVGIVSTTEDGERDNIVDFVNH---SKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILG-TVTKKCKVK----KEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLS-GIPLGEWRDLTDDELIDLFKL--


General information:
TITO was launched using:
RESULT:

Template: 2GML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 787 -72663 -92.33 -427.43
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -92.33
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.487

(partial model without unconserved sides chains):
PDB file : Tito_2GML.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GML-query.scw
PDB file : Tito_Scwrl_2GML.pdb: