Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCYNRESNFANQTIDFYCYTEYNGFMTTKGANVMTEVEMKEQVQEVLDK-LRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEEVPGVVEVEQVF-----
1VEH Chain:A ((1-92))-------------------------GSSGSSGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQVSGPSSG


General information:
TITO was launched using:
RESULT:

Template: 1VEH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 270 1689 6.26 19.64
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 6.26
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_1VEH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VEH-query.scw
PDB file : Tito_Scwrl_1VEH.pdb: