Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAPTGTSATTTRPWTPRIATQLSVLACAAFIYVTAEILPVGALSAIARN-LRVSVVLVGTLLSWYALVAAVTTVPLVRWTAHWPRRRALVVS---LVCLTVSQLVSALAPN-FAVLAAGRVLCAVTHGLL----WAVIAPIATRLVPPSHAGRATTSIYIGTSLALVVGSPLTAAMSLMWGWRLAAVCVTGAAAAVALAARLALPEMVLRADQL-----EHVG----RRARHHRNPRLVKVSVLTMIAVTGHFVSYTYIVVIIRDVV---GVRGPNLAWLLAAYGVAGLVSVPLVARPLDRWPKGAVIV-GMTGLTAAFTLLTALAFGERHTAATALLGTGAIVLWGALATAVSPMLQSAAMRSG-GDDPDGASGL-YVTAFQIGIMAGALLGGLLYERS-LAMMLTASAGLMGVALFGMTVSQHLFENPTLSPGDG |
| 2CFQ Chain:A ((11-396)) | ------------------------MFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVS--RRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRII-GSS--FATSA-L-E--V-VILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLIS----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -321199 for 2964 contacts (-108.4/contact) +
2D Compatibility (PS) -36040 + (NN) 3196 + (LL) 2244
1D Compatibility (HY) -14400 + (ID) 1600
Total energy: -367799.0 ( -124.09 by residue)
QMean score : 0.177
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