Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTRQAGEATEASVRWRAVLLAAVAACAACGLVYELALLTLAASLNGGGIVATSLIVAGYIAALGAGALLIKPLLAHAAIAFIAVEAVLGIIGGLSAAALYAAFAFLDELDGSTLVLAVGTALIGGLVGAEVPLLMTLLQRGRVAGAADAGRTLANLNAADYLGALVGGLAWPFLLLPQLGMIRGAAVTGIVNLAAAGVVSIFLLRHVVSGRQLVTALCALAAALGLIATLLVHSHDIETTGRQQLYADPIIAYRHSAYQEIVV---TRRGDDLRLYLDGGLQFCTRDEYRYTESLVY--PAVSDGARSVLVLGGGDGLAARELLRQPGIEQIVQVELDPAVIELARTTLRDVNAGSLDNPRVHVVIDDAMSWLRGAAVPPAGFDAVIVDLRDPDTPVLGRLYSTEFYALAARALAPGGLMVVQAGSPYSTPTAFWRIISTIRSA-GYAVTPY------HVHVPTF--GDWGFALARLTD---IAPTPAVPSTAPA-LRFLDQQVLEAATVFSGDIRPRTLDPSTLDNPHIVEDMRHGWD |
| 2PT6 Chain:A ((69-307)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKYQNVLVFESTTYGK--VLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYED-KRVNVFIEDASKFLENVT---NTYDVIIVDSSDPIGPA-ETLFNQNFYEKIYNALKPNGYCVAQCES-------LWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKTDTGLTKPNKKLESKEFADLKYYNYENHSAA------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PT6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138521 for 1822 contacts (-76.0/contact) +
2D Compatibility (PS) -24511 + (NN) -14660 + (LL) 24132
1D Compatibility (HY) -18000 + (ID) 3950
Total energy: -175510.0 ( -96.33 by residue)
QMean score : 0.407
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